English   Français Affiliation to phylogenetic groups

 

Affiliation to phylogenetic groups (I to VII) into the Bacillus cereus Group

 

How does this tool work :
panC gene sequence is used for identification to phylogenetic groups (I to VII), according classification proposed by Guinebretière et al. (2008).
This sequence is compared to known sequences in the database of UMR408, INRA-Université d'Avignon, France.

Phenotypic features attributed to the 7 phylogenetic groups can be consulted by this link.

 

Requirements:
The short sequence AACAAAC or AACAGAC is required to initiate alignment. For more information refer to link below.
Proposal and requirement for preparing panC sequence: please click here


The homology search algorithm can be consulted by this link

Contact : M.-H. Guinebretière


How to input sequences?